Genetic principal components for reproductive and productive traits in dual-purpose buffaloes in Colombia.

A multitrait model (MC) and 5 reduced-rank models with principal component structure (components PC, PC, PC, PC, and PC) were compared. The objectives were to determine the most appropriate model for estimating genetic parameters and to evaluate the genetic progress of dual-purpose buffaloes in Colombia using that model. The traits evaluated were weaning weight (WW), yearling weight (W12), weight at 18 mo of age (W18), weight at 2 yr of age (W24), age at first calving (AFC), and milk yield at 270 d of first lactation (MY270). Genealogy and productive information from 34,326 buffaloes born in Colombia between 1997 and 2014 were used. Colombian Association of Buffalo Breeders (ACB) provided the data. Direct additive genetic and residual random effects were included for all the traits. In addition, the maternal additive genetic effect and permanent environmental random effect were included for WW, while a maternal additive genetic effect was included for W12. The fixed effects were contemporary group (farm, year, and calving season: January to April, May to August, or September to December; for all traits) and sex (for WW, W12, W18, and W24). Additionally, parity was included as a fixed effect for WW and W12. Age at weighing was used as a covariate for WW, W12, W18, and W24. Genetic progress of all traits was analyzed using a generalized smooth model (GAM). According to the Akaike information criteria (AIC), the best model was the one with reduced rank and first 3 principal components (PC). This model maintained 100% of the original variance. Genetic parameters estimated with this model were similar to those estimated by MC, but with smaller standard errors. Heritability for weight-related traits ranged between 0.23 and 0.44. Heritabilities for AFC and MY270 were 0.14 and 0.24, respectively. The genetic correlations obtained between all weights (WW, W12, W18, and W24) were positive and high. Correlations between all weights with AFC were negative and moderate. Correlations between all weights with MY270 were positive and moderate, and between MY270 with AFC were negative and low.

Comparison of logistic and neural network models to fit to the egg production curve of White Leghorn hens.

Neural networks are capable of modeling any complex function and can be used in the poultry and animal production areas. The aim of this study was to investigate the possibility of using neural networks on an egg production data set and fitting models to the egg production curve by applying 2 approaches, one using a nonlinear logistic model and the other using 2 artificial neural network models [multilayer perceptron (MLP) and radial basis function]. Two data sets from 2 generations of a White Leghorn strain that had been selected mainly for egg production were used. In the first data set, the mean weekly egg-laying rate was ascertained over a 54-wk egg production period. This data set was used to adjust and test the logistic model and to train and test the neural networks. The second data set, covering 52 wk of egg production, was used to validate the models. The mean absolute deviation, mean square error, and R(2) were used to evaluate the fit of the models. The MLP neural network had the best fit in the test and validation phases. The advantage of using neural networks is that they can be fitted to any kind of data set and do not require model assumptions such as those required in the nonlinear methodology. The results confirm that MLP neural networks can be used as an alternative tool to fit to egg production. The benefits of the MLP are the great flexibility and their lack of a priori assumptions when estimating a noisy nonlinear model.

Alternativas para seleção de touros da raça Nelore considerando características múltiplas de importância econômica / Nellore bull selection alternatives using multiple traits of economic importance

Os dados são provenientes de 234 touros da raça Nelore participantes de um teste de progênie, no período de 1996 a 2003. A diferença esperada na progênie (DEP) de sete características: peso aos 120 e 210 dias, efeito materno (DMPP120 e DMPP210), peso e perímetro escrotal aos 365 e 450 dias, efeito direto (DDP365, DDP450, DDPE365 e DDPE450) e idade ao primeiro parto (DDIPP) foi utilizada para classificar os animais em três grupos, assim como identificar quais as características possuíram maior poder discriminatório na formação de cada grupo. Para tanto, foram utilizados procedimentos estatísticos multivariados de análise de agrupamentos k-médias e componentes principais. Os resultados evidenciaram que, dos três grupos formados, dois se destacaram quanto aos valores médios das DEPs. A importância desses dois grupos de touros foi confirmada pela análise de componentes principais, que associou a eles valores superiores de DEPs diretas de peso e perímetro escrotal. A quantidade da variabilidade original retida pelos dois primeiros componentes principais foi de 70,22 por cento. Estes procedimentos mostraram-se eficientes e constituíram importantes ferramentas para classificar touros, discriminar variáveis, bem como resumir informações multivariadas, podendo ser usados como auxílio valioso na seleção de reprodutores para uso nos programas de melhoramento genético.

The data set is from 234 Nelore bulls which participate of a progeny test in the period from 1996 to 2003. The expected progeny diference (EPDs) of seven economic traits, weights at 120 e 210 days of age, maternal effect (DMPP120 and DMPP210), weights and scrotal circumferences at 365 e 450 days of age, direct effects (DDP365, DDP450, DDPE365 and DDPE450), and age at first calving (DDIPP), were used in order to classify these animals in three groups and verify which EPDs showed greatest discriminating power in forming the groups. The statistical applied techniques were: k-means clusters analysis and principal components analysis. From the three groups formed, two of them stood out in relation to values of the EPDs means. Evidence of the importance of these two groups was observed in the principal component analysis that associate to them higher values of direct EPDs of weight and scrotal circumference. The two first principal components accounted for 70.22 percent of the total original variability. Both techniques could be an important tools to sire classification, variable discrimination, as well as to resume multivariate information, and they could be applied to help selection in animal breeding program.

Características físicas e morfológicas de sêmen de touros jovens das raças Gir, Guzerá, Nelore (Bos taurus indicus) e Caracu (Bos taurus taurus) / Physical and morphological semen characteristics in Gir, Guzera and Nelore (Bos taurus indicus) and Caracu (Bos taurus taurus) young bulls

Foram utilizados 38 tourinhos com idade inicial entre 426 e 462 dias e final entre 751 e 781 dias das raças Nelore, Guzerá, Gir e Caracu, subdivididos em sete grupos genéticos conforme o método de seleçäo, com o objetivo de comparar o desenvolvimento reprodutivo, avaliado pelas características físicas e morfológicas do sêmen (volume, aspecto, turbilhonamento, motilidade progressiva e vigor, morfologia e concentraçao espermáticas), em 11 colheitas com intervalos de 29 dias. Os touros dos grupos Nelore seleçäo (NeS, n=6), Nelore tradicional (NeT, n=9) e Caracu seleçäo (CaS, n=6), com 415, 430 e 419kg de peso, respectivamente, apresentaram diferenças em todas as características quando comparados com o Nelore controle (NeC, n=4), com 302kg de peso, na segunda colheita, e este foi o único a diferir dos outros seis grupamentos na décima primeira colheita (P<0,05). Foram registradas diferenças na motilidade progressiva média dos espermatozóides na terceira colheita entre o grupamento CaS (68,3 por cento) e o Guzerá tradicional (GuT, n=5) (10,0 por cento), assim como entre o CaS (76,7 por cento) e o NeS (45,0 por cento) na quarta colheita (P<0,05). Näo foram registradas diferenças no total de defeitos de espermatozóides nas segunda e última colheitas. Com base na morfologia espermática pode-se concluir que os tourinhos dos grupos genéticos NeT, CaS, Gir Seleçäo (GiS, n=4), Guzerá Seleçao (GuS, n=4), NeC, GuT e NeS alcançaram a maturidade sexual com idades de 547, 532, 578, 544, 547, 572 e 600 dias, e pesos corporais de 430, 440, 389, 420, 336, 451 e 438kg, respectivamente

Experimental toxoplasmosis in pregnant bitches.

Three Toxoplasma gondii free bitches (No. 3-5) were fed 15000 sporulated T. gondii oocysts at 56, 40 and 32 day of gestation and the outcome of the pregnancy was monitored. Two of the three dogs infected during pregnancy showed evidence of congenital infection and one aborted. Two control bitches not fed oocysts delivered eight uninfected healthy pups. This study demonstrated that T. gondii can be congenitally transmitted in dogs when bitches are infected during pregnancy.